Cluster: HRGMv2_3030_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3030
- CGC Family ID: CGCFAM_01359
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3030_2 | HRGMv2_3030_2_104 | 106506 | 107402 | - | GH25 |
| pfam | HRGMv2_3030_2 | HRGMv2_3030_2_105 | 107404 | 107994 | - | Flavodoxin_2 | FMN_red |
| pfam | HRGMv2_3030_2 | HRGMv2_3030_2_106 | 108005 | 108826 | - | PCMT | Ubie_methyltran | Methyltransf_11 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 | Zn_ribbon_RlmA |
| TC | HRGMv2_3030_2 | HRGMv2_3030_2_107 | 108823 | 110217 | - | 2.A.66.1.45 |
Gene ID: HRGMv2_3030_2_104
Type: CAZyme
Location: 106506 - 107402 (-)
Type: CAZyme
Location: 106506 - 107402 (-)
Gene ID: HRGMv2_3030_2_105
Type: pfam
Location: 107404 - 107994 (-)
Type: pfam
Location: 107404 - 107994 (-)
Gene ID: HRGMv2_3030_2_106
Type: pfam
Location: 108005 - 108826 (-)
Type: pfam
Location: 108005 - 108826 (-)
Gene ID: HRGMv2_3030_2_107
Type: TC
Location: 108823 - 110217 (-)
Type: TC
Location: 108823 - 110217 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp900757415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3030_2_105 | vegetarian > vegan | 1.63066 | 0.00364 |