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Cluster: HRGMv2_3030_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3030_2 HRGMv2_3030_2_24 21805 24225 - GT35
CAZyme HRGMv2_3030_2 HRGMv2_3030_2_25 24240 25667 - GT5
pfam HRGMv2_3030_2 HRGMv2_3030_2_26 25879 26991 - NTP_transferase | Hexapep_GlmU
pfam HRGMv2_3030_2 HRGMv2_3030_2_27 26988 28202 - NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_3030_2 HRGMv2_3030_2_28 28239 30107 - GH13_9
TC HRGMv2_3030_2 HRGMv2_3030_2_29 30402 31649 - 3.A.1.122.2
pfam HRGMv2_3030_2 HRGMv2_3030_2_30 31662 33458 - Biotin_lipoyl_2
TC HRGMv2_3030_2 HRGMv2_3030_2_31 33451 34131 - 3.A.1.122.2
Gene ID: HRGMv2_3030_2_24
Type: CAZyme
Location: 21805 - 24225 (-)
Gene ID: HRGMv2_3030_2_25
Type: CAZyme
Location: 24240 - 25667 (-)
Gene ID: HRGMv2_3030_2_26
Type: pfam
Location: 25879 - 26991 (-)
Gene ID: HRGMv2_3030_2_27
Type: pfam
Location: 26988 - 28202 (-)
Gene ID: HRGMv2_3030_2_28
Type: CAZyme
Location: 28239 - 30107 (-)
Gene ID: HRGMv2_3030_2_29
Type: TC
Location: 30402 - 31649 (-)
Gene ID: HRGMv2_3030_2_30
Type: pfam
Location: 31662 - 33458 (-)
Gene ID: HRGMv2_3030_2_31
Type: TC
Location: 33451 - 34131 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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