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Cluster: HRGMv2_3030_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3030_31 HRGMv2_3030_31_10 6112 6309 + 1.E.18.1.3
pfam HRGMv2_3030_31 HRGMv2_3030_31_11 6313 6990 + Amidase_3 | SPOR
STP HRGMv2_3030_31 HRGMv2_3030_31_12 7104 7685 + TetR_N
TC HRGMv2_3030_31 HRGMv2_3030_31_13 8177 9514 + 2.A.40.1.4
CAZyme HRGMv2_3030_31 HRGMv2_3030_31_14 9572 11095 - GH77
TC HRGMv2_3030_31 HRGMv2_3030_31_15 11193 12035 - 3.A.1.1.45
TC HRGMv2_3030_31 HRGMv2_3030_31_16 12035 12886 - 3.A.1.1.45
TC HRGMv2_3030_31 HRGMv2_3030_31_17 13022 14332 - 3.A.1.1.45
Gene ID: HRGMv2_3030_31_10
Type: TC
Location: 6112 - 6309 (+)
Gene ID: HRGMv2_3030_31_11
Type: pfam
Location: 6313 - 6990 (+)
Gene ID: HRGMv2_3030_31_12
Type: STP
Location: 7104 - 7685 (+)
Gene ID: HRGMv2_3030_31_13
Type: TC
Location: 8177 - 9514 (+)
Gene ID: HRGMv2_3030_31_14
Type: CAZyme
Location: 9572 - 11095 (-)
Gene ID: HRGMv2_3030_31_15
Type: TC
Location: 11193 - 12035 (-)
Gene ID: HRGMv2_3030_31_16
Type: TC
Location: 12035 - 12886 (-)
Gene ID: HRGMv2_3030_31_17
Type: TC
Location: 13022 - 14332 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3030_31_10 vegetarian > vegan 3.32643 0.00364
HRGMv2_3030_31_12 vegetarian > vegan 1.31417 0.00364

🧭 Explore Read Mapping of CGC

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