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Cluster: HRGMv2_3030_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3030_24 HRGMv2_3030_24_1 229 2397 + 1.C.105.2.8
TC HRGMv2_3030_24 HRGMv2_3030_24_2 2461 3285 + 3.A.1.132.3
TC HRGMv2_3030_24 HRGMv2_3030_24_3 3446 4189 + 2.A.5.5.2
TC HRGMv2_3030_24 HRGMv2_3030_24_4 4318 5952 - 3.A.1.134.9
TC HRGMv2_3030_24 HRGMv2_3030_24_5 5949 6713 - 3.A.1.134.9
CAZyme HRGMv2_3030_24 HRGMv2_3030_24_6 6839 8083 - GT2
NULL(UNKNOWN) HRGMv2_3030_24 HRGMv2_3030_24_7 8211 10103 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3030_24 HRGMv2_3030_24_8 10078 10974 - 3.A.1.105.1
TF HRGMv2_3030_24 HRGMv2_3030_24_9 10974 11333 - GntR
pfam HRGMv2_3030_24 HRGMv2_3030_24_10 11543 12562 + ATPgrasp_ST
TC HRGMv2_3030_24 HRGMv2_3030_24_11 12909 14648 - 2.A.35.2.1
TC HRGMv2_3030_24 HRGMv2_3030_24_12 15006 16724 - 2.A.35.2.1
TC HRGMv2_3030_24 HRGMv2_3030_24_13 16984 18414 - 2.A.22.5.3
TF HRGMv2_3030_24 HRGMv2_3030_24_14 18659 19366 - Trans_reg_C
STP HRGMv2_3030_24 HRGMv2_3030_24_15 19356 20483 - HATPase_c | HisKA
TC HRGMv2_3030_24 HRGMv2_3030_24_16 21032 22897 + 1.C.39.4.5
Gene ID: HRGMv2_3030_24_1
Type: TC
Location: 229 - 2397 (+)
Gene ID: HRGMv2_3030_24_2
Type: TC
Location: 2461 - 3285 (+)
Gene ID: HRGMv2_3030_24_3
Type: TC
Location: 3446 - 4189 (+)
Gene ID: HRGMv2_3030_24_4
Type: TC
Location: 4318 - 5952 (-)
Gene ID: HRGMv2_3030_24_5
Type: TC
Location: 5949 - 6713 (-)
Gene ID: HRGMv2_3030_24_6
Type: CAZyme
Location: 6839 - 8083 (-)
Gene ID: HRGMv2_3030_24_7
Type:
Location: 8211 - 10103 (-)
Gene ID: HRGMv2_3030_24_8
Type: TC
Location: 10078 - 10974 (-)
Gene ID: HRGMv2_3030_24_9
Type: TF
Location: 10974 - 11333 (-)
Gene ID: HRGMv2_3030_24_10
Type: pfam
Location: 11543 - 12562 (+)
Gene ID: HRGMv2_3030_24_11
Type: TC
Location: 12909 - 14648 (-)
Gene ID: HRGMv2_3030_24_12
Type: TC
Location: 15006 - 16724 (-)
Gene ID: HRGMv2_3030_24_13
Type: TC
Location: 16984 - 18414 (-)
Gene ID: HRGMv2_3030_24_14
Type: TF
Location: 18659 - 19366 (-)
Gene ID: HRGMv2_3030_24_15
Type: STP
Location: 19356 - 20483 (-)
Gene ID: HRGMv2_3030_24_16
Type: TC
Location: 21032 - 22897 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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