Cluster: HRGMv2_3029_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3029
- CGC Family ID: CGCFAM_00092
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3029_31 | HRGMv2_3029_31_3 | 1278 | 3140 | + | 3.A.3.6.10 |
| CAZyme | HRGMv2_3029_31 | HRGMv2_3029_31_4 | 3688 | 5862 | - | GH112 |
| pfam | HRGMv2_3029_31 | HRGMv2_3029_31_5 | 6225 | 6449 | - | DUF6903 |
| TC | HRGMv2_3029_31 | HRGMv2_3029_31_6 | 6491 | 7414 | - | 3.A.1.1.18 |
| TC | HRGMv2_3029_31 | HRGMv2_3029_31_7 | 7434 | 8324 | - | 3.A.1.1.18 |
Gene ID: HRGMv2_3029_31_3
Type: TC
Location: 1278 - 3140 (+)
Type: TC
Location: 1278 - 3140 (+)
Gene ID: HRGMv2_3029_31_4
Type: CAZyme
Location: 3688 - 5862 (-)
Type: CAZyme
Location: 3688 - 5862 (-)
Gene ID: HRGMv2_3029_31_5
Type: pfam
Location: 6225 - 6449 (-)
Type: pfam
Location: 6225 - 6449 (-)
Gene ID: HRGMv2_3029_31_6
Type: TC
Location: 6491 - 7414 (-)
Type: TC
Location: 6491 - 7414 (-)
Gene ID: HRGMv2_3029_31_7
Type: TC
Location: 7434 - 8324 (-)
Type: TC
Location: 7434 - 8324 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAKTXU01
Species
CAKTXU01 sp934615635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.