Cluster: HRGMv2_3029_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_3029
- CGC Family ID: CGCFAM_00015
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3029_27 | HRGMv2_3029_27_6 | 3961 | 4932 | + | GT2 |
| pfam | HRGMv2_3029_27 | HRGMv2_3029_27_7 | 4932 | 6470 | + | O-antigen_lig |
| CAZyme | HRGMv2_3029_27 | HRGMv2_3029_27_8 | 6467 | 7618 | + | GT4 |
| CAZyme | HRGMv2_3029_27 | HRGMv2_3029_27_9 | 7650 | 8615 | + | GT2 |
| CAZyme | HRGMv2_3029_27 | HRGMv2_3029_27_10 | 8691 | 9707 | + | GT2 |
| TC | HRGMv2_3029_27 | HRGMv2_3029_27_11 | 9682 | 11226 | + | 2.A.66.1.40 |
Gene ID: HRGMv2_3029_27_6
Type: CAZyme
Location: 3961 - 4932 (+)
Type: CAZyme
Location: 3961 - 4932 (+)
Gene ID: HRGMv2_3029_27_7
Type: pfam
Location: 4932 - 6470 (+)
Type: pfam
Location: 4932 - 6470 (+)
Gene ID: HRGMv2_3029_27_8
Type: CAZyme
Location: 6467 - 7618 (+)
Type: CAZyme
Location: 6467 - 7618 (+)
Gene ID: HRGMv2_3029_27_9
Type: CAZyme
Location: 7650 - 8615 (+)
Type: CAZyme
Location: 7650 - 8615 (+)
Gene ID: HRGMv2_3029_27_10
Type: CAZyme
Location: 8691 - 9707 (+)
Type: CAZyme
Location: 8691 - 9707 (+)
Gene ID: HRGMv2_3029_27_11
Type: TC
Location: 9682 - 11226 (+)
Type: TC
Location: 9682 - 11226 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAKTXU01
Species
CAKTXU01 sp934615635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.