Cluster: HRGMv2_3029_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3029
- CGC Family ID: CGCFAM_00172
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3029_20 | HRGMv2_3029_20_15 | 12947 | 15418 | + | 3.A.12.1.1 |
| NULL(UNKNOWN) | HRGMv2_3029_20 | HRGMv2_3029_20_16 | 16374 | 16514 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3029_20 | HRGMv2_3029_20_17 | 16662 | 18164 | - | GH77 |
| TC | HRGMv2_3029_20 | HRGMv2_3029_20_18 | 18295 | 20280 | - | 3.A.1.134.9 |
| TC | HRGMv2_3029_20 | HRGMv2_3029_20_19 | 20273 | 21040 | - | 3.A.1.134.4 |
Gene ID: HRGMv2_3029_20_15
Type: TC
Location: 12947 - 15418 (+)
Type: TC
Location: 12947 - 15418 (+)
Gene ID: HRGMv2_3029_20_16
Type:
Location: 16374 - 16514 (-)
Type:
Location: 16374 - 16514 (-)
Gene ID: HRGMv2_3029_20_17
Type: CAZyme
Location: 16662 - 18164 (-)
Type: CAZyme
Location: 16662 - 18164 (-)
Gene ID: HRGMv2_3029_20_18
Type: TC
Location: 18295 - 20280 (-)
Type: TC
Location: 18295 - 20280 (-)
Gene ID: HRGMv2_3029_20_19
Type: TC
Location: 20273 - 21040 (-)
Type: TC
Location: 20273 - 21040 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAKTXU01
Species
CAKTXU01 sp934615635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3029_20_19 | vegetarian > vegan | 1.12158 | 0.01057 |