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Cluster: HRGMv2_3029_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3029_17 HRGMv2_3029_17_11 10819 12144 + 3.D.6.1.2
TC HRGMv2_3029_17 HRGMv2_3029_17_12 12128 13129 + 3.D.6.1.2
pfam HRGMv2_3029_17 HRGMv2_3029_17_13 13126 13692 + FMN_bind
TC HRGMv2_3029_17 HRGMv2_3029_17_14 13694 14413 + 3.D.6.1.2
TC HRGMv2_3029_17 HRGMv2_3029_17_15 14413 15012 + 3.D.6.1.2
TC HRGMv2_3029_17 HRGMv2_3029_17_16 15044 15865 + 3.D.6.1.3
pfam HRGMv2_3029_17 HRGMv2_3029_17_17 16516 19449 + BcrAD_BadFG | BcrAD_BadFG | DUF2229
NULL(UNKNOWN) HRGMv2_3029_17 HRGMv2_3029_17_18 19529 20875 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3029_17 HRGMv2_3029_17_19 21124 22869 + GH127
Gene ID: HRGMv2_3029_17_11
Type: TC
Location: 10819 - 12144 (+)
Gene ID: HRGMv2_3029_17_12
Type: TC
Location: 12128 - 13129 (+)
Gene ID: HRGMv2_3029_17_13
Type: pfam
Location: 13126 - 13692 (+)
Gene ID: HRGMv2_3029_17_14
Type: TC
Location: 13694 - 14413 (+)
Gene ID: HRGMv2_3029_17_15
Type: TC
Location: 14413 - 15012 (+)
Gene ID: HRGMv2_3029_17_16
Type: TC
Location: 15044 - 15865 (+)
Gene ID: HRGMv2_3029_17_17
Type: pfam
Location: 16516 - 19449 (+)
Gene ID: HRGMv2_3029_17_18
Type:
Location: 19529 - 20875 (+)
Gene ID: HRGMv2_3029_17_19
Type: CAZyme
Location: 21124 - 22869 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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