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Cluster: HRGMv2_3028_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3028_41 HRGMv2_3028_41_17 14943 16319 + 2.A.66.1.28
STP HRGMv2_3028_41 HRGMv2_3028_41_18 16379 17326 - Glucokinase
TC HRGMv2_3028_41 HRGMv2_3028_41_19 17364 18548 - 3.A.1.1.26
CAZyme HRGMv2_3028_41 HRGMv2_3028_41_20 18536 20035 - GH77
TC HRGMv2_3028_41 HRGMv2_3028_41_21 20049 20894 - 3.A.1.1.45
TC HRGMv2_3028_41 HRGMv2_3028_41_22 20894 21745 - 3.A.1.1.45
TC HRGMv2_3028_41 HRGMv2_3028_41_23 21843 23159 - 3.A.1.1.45
Gene ID: HRGMv2_3028_41_17
Type: TC
Location: 14943 - 16319 (+)
Gene ID: HRGMv2_3028_41_18
Type: STP
Location: 16379 - 17326 (-)
Gene ID: HRGMv2_3028_41_19
Type: TC
Location: 17364 - 18548 (-)
Gene ID: HRGMv2_3028_41_20
Type: CAZyme
Location: 18536 - 20035 (-)
Gene ID: HRGMv2_3028_41_21
Type: TC
Location: 20049 - 20894 (-)
Gene ID: HRGMv2_3028_41_22
Type: TC
Location: 20894 - 21745 (-)
Gene ID: HRGMv2_3028_41_23
Type: TC
Location: 21843 - 23159 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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