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Cluster: HRGMv2_3028_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3028_60 HRGMv2_3028_60_1 3 1853 - GT35
TF HRGMv2_3028_60 HRGMv2_3028_60_2 2034 2930 + HTH_AraC | HTH_AraC
TF HRGMv2_3028_60 HRGMv2_3028_60_3 3329 4060 - HTH_AraC | HTH_AraC
TC HRGMv2_3028_60 HRGMv2_3028_60_4 4057 5757 - 8.A.59.2.1
TC HRGMv2_3028_60 HRGMv2_3028_60_5 5754 6776 - 3.A.1.20.1
pfam HRGMv2_3028_60 HRGMv2_3028_60_6 6833 7636 - Hydrolase_3
TC HRGMv2_3028_60 HRGMv2_3028_60_7 7706 9352 - 3.A.1.1.16
TC HRGMv2_3028_60 HRGMv2_3028_60_8 9356 11161 - 3.A.1.20.2
Gene ID: HRGMv2_3028_60_1
Type: CAZyme
Location: 3 - 1853 (-)
Gene ID: HRGMv2_3028_60_2
Type: TF
Location: 2034 - 2930 (+)
Gene ID: HRGMv2_3028_60_3
Type: TF
Location: 3329 - 4060 (-)
Gene ID: HRGMv2_3028_60_4
Type: TC
Location: 4057 - 5757 (-)
Gene ID: HRGMv2_3028_60_5
Type: TC
Location: 5754 - 6776 (-)
Gene ID: HRGMv2_3028_60_6
Type: pfam
Location: 6833 - 7636 (-)
Gene ID: HRGMv2_3028_60_7
Type: TC
Location: 7706 - 9352 (-)
Gene ID: HRGMv2_3028_60_8
Type: TC
Location: 9356 - 11161 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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