Cluster: HRGMv2_3027_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3027
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3027_24 | HRGMv2_3027_24_3 | 1905 | 3035 | - | GH63 |
| pfam | HRGMv2_3027_24 | HRGMv2_3027_24_4 | 3248 | 4495 | + | RhaA |
| CAZyme | HRGMv2_3027_24 | HRGMv2_3027_24_5 | 4558 | 8400 | - | CBM13 | CBM13 | CBM13 | GH5_35 |
| pfam | HRGMv2_3027_24 | HRGMv2_3027_24_6 | 8718 | 9215 | - | CarD_TRCF_RID |
| TF | HRGMv2_3027_24 | HRGMv2_3027_24_7 | 9388 | 9756 | + | HTH_5 |
| TC | HRGMv2_3027_24 | HRGMv2_3027_24_8 | 9767 | 11617 | + | 3.A.3.6.5 |
Gene ID: HRGMv2_3027_24_3
Type: CAZyme
Location: 1905 - 3035 (-)
Type: CAZyme
Location: 1905 - 3035 (-)
Gene ID: HRGMv2_3027_24_4
Type: pfam
Location: 3248 - 4495 (+)
Type: pfam
Location: 3248 - 4495 (+)
Gene ID: HRGMv2_3027_24_5
Type: CAZyme
Location: 4558 - 8400 (-)
Type: CAZyme
Location: 4558 - 8400 (-)
Gene ID: HRGMv2_3027_24_6
Type: pfam
Location: 8718 - 9215 (-)
Type: pfam
Location: 8718 - 9215 (-)
Gene ID: HRGMv2_3027_24_7
Type: TF
Location: 9388 - 9756 (+)
Type: TF
Location: 9388 - 9756 (+)
Gene ID: HRGMv2_3027_24_8
Type: TC
Location: 9767 - 11617 (+)
Type: TC
Location: 9767 - 11617 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA737
Species
UBA737 sp934486755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.