Cluster: HRGMv2_3027_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3027
- CGC Family ID: CGCFAM_01736
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3027_2 | HRGMv2_3027_2_24 | 36753 | 37337 | - | 3.D.6.1.2 |
| TC | HRGMv2_3027_2 | HRGMv2_3027_2_25 | 37327 | 38025 | - | 3.D.6.1.2 |
| pfam | HRGMv2_3027_2 | HRGMv2_3027_2_26 | 38025 | 38606 | - | FMN_bind |
| TC | HRGMv2_3027_2 | HRGMv2_3027_2_27 | 38599 | 39534 | - | 3.D.6.1.2 |
| TC | HRGMv2_3027_2 | HRGMv2_3027_2_28 | 39527 | 40864 | - | 3.D.6.1.2 |
| TF | HRGMv2_3027_2 | HRGMv2_3027_2_29 | 40984 | 41190 | - | HTH_3 |
| CAZyme | HRGMv2_3027_2 | HRGMv2_3027_2_30 | 41388 | 42392 | + | GT2 |
Gene ID: HRGMv2_3027_2_24
Type: TC
Location: 36753 - 37337 (-)
Type: TC
Location: 36753 - 37337 (-)
Gene ID: HRGMv2_3027_2_25
Type: TC
Location: 37327 - 38025 (-)
Type: TC
Location: 37327 - 38025 (-)
Gene ID: HRGMv2_3027_2_26
Type: pfam
Location: 38025 - 38606 (-)
Type: pfam
Location: 38025 - 38606 (-)
Gene ID: HRGMv2_3027_2_27
Type: TC
Location: 38599 - 39534 (-)
Type: TC
Location: 38599 - 39534 (-)
Gene ID: HRGMv2_3027_2_28
Type: TC
Location: 39527 - 40864 (-)
Type: TC
Location: 39527 - 40864 (-)
Gene ID: HRGMv2_3027_2_29
Type: TF
Location: 40984 - 41190 (-)
Type: TF
Location: 40984 - 41190 (-)
Gene ID: HRGMv2_3027_2_30
Type: CAZyme
Location: 41388 - 42392 (+)
Type: CAZyme
Location: 41388 - 42392 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA737
Species
UBA737 sp934486755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.