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Cluster: HRGMv2_3027_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3027_51 HRGMv2_3027_51_3 2990 3718 + 3.A.1.1.45
TC HRGMv2_3027_51 HRGMv2_3027_51_4 3765 4325 + 3.A.1.1.45
TC HRGMv2_3027_51 HRGMv2_3027_51_5 4326 5171 + 3.A.1.1.45
TC HRGMv2_3027_51 HRGMv2_3027_51_6 5171 6004 + 3.A.1.1.45
CAZyme HRGMv2_3027_51 HRGMv2_3027_51_7 5988 7469 + GH77
pfam HRGMv2_3027_51 HRGMv2_3027_51_8 7693 8121 + Ribosomal_L13
pfam HRGMv2_3027_51 HRGMv2_3027_51_9 8139 8537 + Ribosomal_S9
TC HRGMv2_3027_51 HRGMv2_3027_51_10 8609 9619 - 2.A.19.5.3
Gene ID: HRGMv2_3027_51_3
Type: TC
Location: 2990 - 3718 (+)
Gene ID: HRGMv2_3027_51_4
Type: TC
Location: 3765 - 4325 (+)
Gene ID: HRGMv2_3027_51_5
Type: TC
Location: 4326 - 5171 (+)
Gene ID: HRGMv2_3027_51_6
Type: TC
Location: 5171 - 6004 (+)
Gene ID: HRGMv2_3027_51_7
Type: CAZyme
Location: 5988 - 7469 (+)
Gene ID: HRGMv2_3027_51_8
Type: pfam
Location: 7693 - 8121 (+)
Gene ID: HRGMv2_3027_51_9
Type: pfam
Location: 8139 - 8537 (+)
Gene ID: HRGMv2_3027_51_10
Type: TC
Location: 8609 - 9619 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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