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Cluster: HRGMv2_3024_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3024_8 HRGMv2_3024_8_36 36334 37515 - 2.A.4.7.6
TC HRGMv2_3024_8 HRGMv2_3024_8_37 37691 39790 - 3.A.3.6.10
TF HRGMv2_3024_8 HRGMv2_3024_8_38 39800 40120 - HTH_5
CAZyme HRGMv2_3024_8 HRGMv2_3024_8_39 40685 43357 - CBM13
TF HRGMv2_3024_8 HRGMv2_3024_8_40 43498 43743 + HTH_3
TC HRGMv2_3024_8 HRGMv2_3024_8_41 43826 45274 - 2.A.38.1.1
TC HRGMv2_3024_8 HRGMv2_3024_8_42 45290 46648 - 2.A.38.1.1
TC HRGMv2_3024_8 HRGMv2_3024_8_43 46983 48584 + 2.A.36.6.11
Gene ID: HRGMv2_3024_8_36
Type: TC
Location: 36334 - 37515 (-)
Gene ID: HRGMv2_3024_8_37
Type: TC
Location: 37691 - 39790 (-)
Gene ID: HRGMv2_3024_8_38
Type: TF
Location: 39800 - 40120 (-)
Gene ID: HRGMv2_3024_8_39
Type: CAZyme
Location: 40685 - 43357 (-)
Gene ID: HRGMv2_3024_8_40
Type: TF
Location: 43498 - 43743 (+)
Gene ID: HRGMv2_3024_8_41
Type: TC
Location: 43826 - 45274 (-)
Gene ID: HRGMv2_3024_8_42
Type: TC
Location: 45290 - 46648 (-)
Gene ID: HRGMv2_3024_8_43
Type: TC
Location: 46983 - 48584 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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