Cluster: HRGMv2_3024_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3024
- CGC Family ID: CGCFAM_01046
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3024_6 | HRGMv2_3024_6_68 | 74625 | 75467 | + | 3.A.1.103.5 |
| TC | HRGMv2_3024_6 | HRGMv2_3024_6_69 | 75471 | 76745 | + | 3.A.1.103.5 |
| pfam | HRGMv2_3024_6 | HRGMv2_3024_6_70 | 76800 | 78521 | - | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| pfam | HRGMv2_3024_6 | HRGMv2_3024_6_71 | 78669 | 81518 | - | Acyl_transf_3 |
| CAZyme | HRGMv2_3024_6 | HRGMv2_3024_6_72 | 81674 | 82618 | - | GT2 |
Gene ID: HRGMv2_3024_6_68
Type: TC
Location: 74625 - 75467 (+)
Type: TC
Location: 74625 - 75467 (+)
Gene ID: HRGMv2_3024_6_69
Type: TC
Location: 75471 - 76745 (+)
Type: TC
Location: 75471 - 76745 (+)
Gene ID: HRGMv2_3024_6_70
Type: pfam
Location: 76800 - 78521 (-)
Type: pfam
Location: 76800 - 78521 (-)
Gene ID: HRGMv2_3024_6_71
Type: pfam
Location: 78669 - 81518 (-)
Type: pfam
Location: 78669 - 81518 (-)
Gene ID: HRGMv2_3024_6_72
Type: CAZyme
Location: 81674 - 82618 (-)
Type: CAZyme
Location: 81674 - 82618 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp958403905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.