Cluster: HRGMv2_3024_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3024
- CGC Family ID: CGCFAM_00237
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3024_5 | HRGMv2_3024_5_74 | 76496 | 77512 | - | GH13_11 |
| CAZyme | HRGMv2_3024_5 | HRGMv2_3024_5_75 | 77491 | 78582 | - | GH13_11 |
| pfam | HRGMv2_3024_5 | HRGMv2_3024_5_76 | 78741 | 79307 | - | Thia_YuaJ |
| pfam | HRGMv2_3024_5 | HRGMv2_3024_5_77 | 79375 | 80220 | - | QRPTase_C | QRPTase_N |
| TC | HRGMv2_3024_5 | HRGMv2_3024_5_78 | 80217 | 81686 | - | 3.D.10.1.4 |
Gene ID: HRGMv2_3024_5_74
Type: CAZyme
Location: 76496 - 77512 (-)
Type: CAZyme
Location: 76496 - 77512 (-)
Gene ID: HRGMv2_3024_5_75
Type: CAZyme
Location: 77491 - 78582 (-)
Type: CAZyme
Location: 77491 - 78582 (-)
Gene ID: HRGMv2_3024_5_76
Type: pfam
Location: 78741 - 79307 (-)
Type: pfam
Location: 78741 - 79307 (-)
Gene ID: HRGMv2_3024_5_77
Type: pfam
Location: 79375 - 80220 (-)
Type: pfam
Location: 79375 - 80220 (-)
Gene ID: HRGMv2_3024_5_78
Type: TC
Location: 80217 - 81686 (-)
Type: TC
Location: 80217 - 81686 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp958403905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.