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Cluster: HRGMv2_3024_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3024_2 HRGMv2_3024_2_139 118298 119803 - 4.C.1.1.7
STP HRGMv2_3024_2 HRGMv2_3024_2_140 119829 121658 - SIS | SIS
CAZyme HRGMv2_3024_2 HRGMv2_3024_2_141 121699 122697 - GT2
CAZyme HRGMv2_3024_2 HRGMv2_3024_2_142 122704 123741 - GT2
TC HRGMv2_3024_2 HRGMv2_3024_2_143 123754 125619 - 9.B.18.2.1
TC HRGMv2_3024_2 HRGMv2_3024_2_144 125723 126067 - 2.A.7.33.5
pfam HRGMv2_3024_2 HRGMv2_3024_2_145 126060 126419 - EamA
CAZyme HRGMv2_3024_2 HRGMv2_3024_2_146 126403 127368 - GT2
Gene ID: HRGMv2_3024_2_139
Type: TC
Location: 118298 - 119803 (-)
Gene ID: HRGMv2_3024_2_140
Type: STP
Location: 119829 - 121658 (-)
Gene ID: HRGMv2_3024_2_141
Type: CAZyme
Location: 121699 - 122697 (-)
Gene ID: HRGMv2_3024_2_142
Type: CAZyme
Location: 122704 - 123741 (-)
Gene ID: HRGMv2_3024_2_143
Type: TC
Location: 123754 - 125619 (-)
Gene ID: HRGMv2_3024_2_144
Type: TC
Location: 125723 - 126067 (-)
Gene ID: HRGMv2_3024_2_145
Type: pfam
Location: 126060 - 126419 (-)
Gene ID: HRGMv2_3024_2_146
Type: CAZyme
Location: 126403 - 127368 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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