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Cluster: HRGMv2_3024_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3024_1 HRGMv2_3024_1_209 215930 217402 - 9.A.11.1.2
pfam HRGMv2_3024_1 HRGMv2_3024_1_210 217491 218168 + DUF421
pfam HRGMv2_3024_1 HRGMv2_3024_1_211 218165 218545 + DUF4363
TC HRGMv2_3024_1 HRGMv2_3024_1_212 218546 219385 - 3.A.1.15.3
TC HRGMv2_3024_1 HRGMv2_3024_1_213 219382 220125 - 3.A.1.15.15
TC HRGMv2_3024_1 HRGMv2_3024_1_214 220125 221108 - 3.A.1.15.3
TC HRGMv2_3024_1 HRGMv2_3024_1_215 221191 222198 - 2.A.6.4.2
TC HRGMv2_3024_1 HRGMv2_3024_1_216 222188 223597 - 2.A.6.4.2
STP HRGMv2_3024_1 HRGMv2_3024_1_217 223830 225110 - Aminotran_1_2
TC HRGMv2_3024_1 HRGMv2_3024_1_218 225293 226009 - 8.A.3.2.1
pfam HRGMv2_3024_1 HRGMv2_3024_1_219 226015 226680 - Wzz
TC HRGMv2_3024_1 HRGMv2_3024_1_220 226859 228097 - 3.B.1.1.3
pfam HRGMv2_3024_1 HRGMv2_3024_1_221 228128 228568 - OAD_gamma
CAZyme HRGMv2_3024_1 HRGMv2_3024_1_222 228752 229915 - GH3
Gene ID: HRGMv2_3024_1_209
Type: TC
Location: 215930 - 217402 (-)
Gene ID: HRGMv2_3024_1_210
Type: pfam
Location: 217491 - 218168 (+)
Gene ID: HRGMv2_3024_1_211
Type: pfam
Location: 218165 - 218545 (+)
Gene ID: HRGMv2_3024_1_212
Type: TC
Location: 218546 - 219385 (-)
Gene ID: HRGMv2_3024_1_213
Type: TC
Location: 219382 - 220125 (-)
Gene ID: HRGMv2_3024_1_214
Type: TC
Location: 220125 - 221108 (-)
Gene ID: HRGMv2_3024_1_215
Type: TC
Location: 221191 - 222198 (-)
Gene ID: HRGMv2_3024_1_216
Type: TC
Location: 222188 - 223597 (-)
Gene ID: HRGMv2_3024_1_217
Type: STP
Location: 223830 - 225110 (-)
Gene ID: HRGMv2_3024_1_218
Type: TC
Location: 225293 - 226009 (-)
Gene ID: HRGMv2_3024_1_219
Type: pfam
Location: 226015 - 226680 (-)
Gene ID: HRGMv2_3024_1_220
Type: TC
Location: 226859 - 228097 (-)
Gene ID: HRGMv2_3024_1_221
Type: pfam
Location: 228128 - 228568 (-)
Gene ID: HRGMv2_3024_1_222
Type: CAZyme
Location: 228752 - 229915 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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