Cluster: HRGMv2_3024_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3024
- CGC Family ID: CGCFAM_09380
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3024_25 | HRGMv2_3024_25_15 | 15077 | 16717 | - | 4.C.1.1.6 |
| CAZyme | HRGMv2_3024_25 | HRGMv2_3024_25_16 | 17225 | 21304 | - | GH13_19 |
| TC | HRGMv2_3024_25 | HRGMv2_3024_25_17 | 21861 | 23273 | + | 3.A.1.1.45 |
| TC | HRGMv2_3024_25 | HRGMv2_3024_25_18 | 23437 | 24279 | + | 3.A.1.1.45 |
| TC | HRGMv2_3024_25 | HRGMv2_3024_25_19 | 24279 | 25157 | + | 3.A.1.1.45 |
Gene ID: HRGMv2_3024_25_15
Type: TC
Location: 15077 - 16717 (-)
Type: TC
Location: 15077 - 16717 (-)
Gene ID: HRGMv2_3024_25_16
Type: CAZyme
Location: 17225 - 21304 (-)
Type: CAZyme
Location: 17225 - 21304 (-)
Gene ID: HRGMv2_3024_25_17
Type: TC
Location: 21861 - 23273 (+)
Type: TC
Location: 21861 - 23273 (+)
Gene ID: HRGMv2_3024_25_18
Type: TC
Location: 23437 - 24279 (+)
Type: TC
Location: 23437 - 24279 (+)
Gene ID: HRGMv2_3024_25_19
Type: TC
Location: 24279 - 25157 (+)
Type: TC
Location: 24279 - 25157 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp958403905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.