Cluster: HRGMv2_3024_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3024
- CGC Family ID: CGCFAM_06200
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3024_17 | HRGMv2_3024_17_21 | 27047 | 27748 | - | 3.A.1.122.7 |
| STP | HRGMv2_3024_17 | HRGMv2_3024_17_22 | 27906 | 29111 | - | ACT |
| pfam | HRGMv2_3024_17 | HRGMv2_3024_17_23 | 29253 | 30488 | - | Homoserine_dh | NAD_binding_3 |
| CAZyme | HRGMv2_3024_17 | HRGMv2_3024_17_24 | 30583 | 33000 | - | GT51 |
Gene ID: HRGMv2_3024_17_21
Type: TC
Location: 27047 - 27748 (-)
Type: TC
Location: 27047 - 27748 (-)
Gene ID: HRGMv2_3024_17_22
Type: STP
Location: 27906 - 29111 (-)
Type: STP
Location: 27906 - 29111 (-)
Gene ID: HRGMv2_3024_17_23
Type: pfam
Location: 29253 - 30488 (-)
Type: pfam
Location: 29253 - 30488 (-)
Gene ID: HRGMv2_3024_17_24
Type: CAZyme
Location: 30583 - 33000 (-)
Type: CAZyme
Location: 30583 - 33000 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp958403905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.