Cluster: HRGMv2_3024_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3024
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3024_16 | HRGMv2_3024_16_33 | 26976 | 27986 | - | 9.A.11.1.1 |
| pfam | HRGMv2_3024_16 | HRGMv2_3024_16_34 | 28044 | 29744 | - | VanW |
| CAZyme | HRGMv2_3024_16 | HRGMv2_3024_16_35 | 30131 | 31255 | + | GT28 |
Gene ID: HRGMv2_3024_16_33
Type: TC
Location: 26976 - 27986 (-)
Type: TC
Location: 26976 - 27986 (-)
Gene ID: HRGMv2_3024_16_34
Type: pfam
Location: 28044 - 29744 (-)
Type: pfam
Location: 28044 - 29744 (-)
Gene ID: HRGMv2_3024_16_35
Type: CAZyme
Location: 30131 - 31255 (+)
Type: CAZyme
Location: 30131 - 31255 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp958403905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.