Cluster: HRGMv2_3024_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3024
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3024_14 | HRGMv2_3024_14_42 | 54796 | 56298 | + | 3.A.1.1.27 |
| TC | HRGMv2_3024_14 | HRGMv2_3024_14_43 | 56295 | 57158 | + | 3.A.1.1.27 |
| CAZyme | HRGMv2_3024_14 | HRGMv2_3024_14_44 | 57454 | 59112 | + | GH13_36 |
Gene ID: HRGMv2_3024_14_42
Type: TC
Location: 54796 - 56298 (+)
Type: TC
Location: 54796 - 56298 (+)
Gene ID: HRGMv2_3024_14_43
Type: TC
Location: 56295 - 57158 (+)
Type: TC
Location: 56295 - 57158 (+)
Gene ID: HRGMv2_3024_14_44
Type: CAZyme
Location: 57454 - 59112 (+)
Type: CAZyme
Location: 57454 - 59112 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E sp958403905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.