Cluster: HRGMv2_3023_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3023
- CGC Family ID: CGCFAM_00092
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3023_17 | HRGMv2_3023_17_8 | 8016 | 8909 | + | 3.A.1.1.32 |
| TC | HRGMv2_3023_17 | HRGMv2_3023_17_9 | 8929 | 9807 | + | 3.A.1.1.18 |
| pfam | HRGMv2_3023_17 | HRGMv2_3023_17_10 | 9861 | 10076 | + | DUF6903 |
| CAZyme | HRGMv2_3023_17 | HRGMv2_3023_17_11 | 10227 | 12398 | + | GH112 |
Gene ID: HRGMv2_3023_17_8
Type: TC
Location: 8016 - 8909 (+)
Type: TC
Location: 8016 - 8909 (+)
Gene ID: HRGMv2_3023_17_9
Type: TC
Location: 8929 - 9807 (+)
Type: TC
Location: 8929 - 9807 (+)
Gene ID: HRGMv2_3023_17_10
Type: pfam
Location: 9861 - 10076 (+)
Type: pfam
Location: 9861 - 10076 (+)
Gene ID: HRGMv2_3023_17_11
Type: CAZyme
Location: 10227 - 12398 (+)
Type: CAZyme
Location: 10227 - 12398 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Limousia
Species
Limousia pullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.