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Cluster: HRGMv2_3023_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3023_5 HRGMv2_3023_5_16 17730 18986 - 3.A.1.122.2
pfam HRGMv2_3023_5 HRGMv2_3023_5_17 19001 20869 - HlyD_3 | Biotin_lipoyl_2
TC HRGMv2_3023_5 HRGMv2_3023_5_18 20856 21554 - 3.A.1.122.2
pfam HRGMv2_3023_5 HRGMv2_3023_5_19 21551 22804 - HlyD_3
pfam HRGMv2_3023_5 HRGMv2_3023_5_20 23168 24310 - Gly_kinase
CAZyme HRGMv2_3023_5 HRGMv2_3023_5_21 24476 28528 - CBM32 | GH136
NULL(UNKNOWN) HRGMv2_3023_5 HRGMv2_3023_5_22 28589 29437 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3023_5 HRGMv2_3023_5_23 29812 30525 - ECF-ribofla_trS | ECF_trnsprt | DUF6580
TC HRGMv2_3023_5 HRGMv2_3023_5_24 30515 32176 - 3.A.1.32.2
Gene ID: HRGMv2_3023_5_16
Type: TC
Location: 17730 - 18986 (-)
Gene ID: HRGMv2_3023_5_17
Type: pfam
Location: 19001 - 20869 (-)
Gene ID: HRGMv2_3023_5_18
Type: TC
Location: 20856 - 21554 (-)
Gene ID: HRGMv2_3023_5_19
Type: pfam
Location: 21551 - 22804 (-)
Gene ID: HRGMv2_3023_5_20
Type: pfam
Location: 23168 - 24310 (-)
Gene ID: HRGMv2_3023_5_21
Type: CAZyme
Location: 24476 - 28528 (-)
Gene ID: HRGMv2_3023_5_22
Type:
Location: 28589 - 29437 (-)
Gene ID: HRGMv2_3023_5_23
Type: pfam
Location: 29812 - 30525 (-)
Gene ID: HRGMv2_3023_5_24
Type: TC
Location: 30515 - 32176 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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