Cluster: HRGMv2_3023_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3023
- CGC Family ID: CGCFAM_00099
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3023_57 | HRGMv2_3023_57_1 | 79 | 1908 | - | 2.A.16.2.2 |
| STP | HRGMv2_3023_57 | HRGMv2_3023_57_2 | 2065 | 2586 | + | Nitroreductase |
| NULL(UNKNOWN) | HRGMv2_3023_57 | HRGMv2_3023_57_3 | 2708 | 2833 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3023_57 | HRGMv2_3023_57_4 | 3057 | 4286 | + | GH1 |
Gene ID: HRGMv2_3023_57_1
Type: TC
Location: 79 - 1908 (-)
Type: TC
Location: 79 - 1908 (-)
Gene ID: HRGMv2_3023_57_2
Type: STP
Location: 2065 - 2586 (+)
Type: STP
Location: 2065 - 2586 (+)
Gene ID: HRGMv2_3023_57_3
Type:
Location: 2708 - 2833 (-)
Type:
Location: 2708 - 2833 (-)
Gene ID: HRGMv2_3023_57_4
Type: CAZyme
Location: 3057 - 4286 (+)
Type: CAZyme
Location: 3057 - 4286 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Limousia
Species
Limousia pullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.