Cluster: HRGMv2_3023_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3023
- CGC Family ID: CGCFAM_00005
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3023_52 | HRGMv2_3023_52_8 | 6946 | 7896 | - | GT2 |
| CAZyme | HRGMv2_3023_52 | HRGMv2_3023_52_9 | 7893 | 8990 | - | GT4 |
| TC | HRGMv2_3023_52 | HRGMv2_3023_52_10 | 8987 | 10519 | - | 2.A.66.1.40 |
| CAZyme | HRGMv2_3023_52 | HRGMv2_3023_52_11 | 10593 | 11450 | - | GT2 |
| TC | HRGMv2_3023_52 | HRGMv2_3023_52_12 | 11486 | 12172 | - | 9.B.18.1.3 |
Gene ID: HRGMv2_3023_52_8
Type: CAZyme
Location: 6946 - 7896 (-)
Type: CAZyme
Location: 6946 - 7896 (-)
Gene ID: HRGMv2_3023_52_9
Type: CAZyme
Location: 7893 - 8990 (-)
Type: CAZyme
Location: 7893 - 8990 (-)
Gene ID: HRGMv2_3023_52_10
Type: TC
Location: 8987 - 10519 (-)
Type: TC
Location: 8987 - 10519 (-)
Gene ID: HRGMv2_3023_52_11
Type: CAZyme
Location: 10593 - 11450 (-)
Type: CAZyme
Location: 10593 - 11450 (-)
Gene ID: HRGMv2_3023_52_12
Type: TC
Location: 11486 - 12172 (-)
Type: TC
Location: 11486 - 12172 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Limousia
Species
Limousia pullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.