Cluster: HRGMv2_3023_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3023
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3023_42 | HRGMv2_3023_42_4 | 1905 | 2279 | + | 9.B.55.2.1 |
| pfam | HRGMv2_3023_42 | HRGMv2_3023_42_5 | 2392 | 3405 | + | DUF5131 | DUF4186 |
| CAZyme | HRGMv2_3023_42 | HRGMv2_3023_42_6 | 3534 | 4277 | + | GT51 |
| NULL(UNKNOWN) | HRGMv2_3023_42 | HRGMv2_3023_42_7 | 4317 | 4553 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3023_42 | HRGMv2_3023_42_8 | 4559 | 5200 | - | 2.A.119.1.3 |
Gene ID: HRGMv2_3023_42_4
Type: TC
Location: 1905 - 2279 (+)
Type: TC
Location: 1905 - 2279 (+)
Gene ID: HRGMv2_3023_42_5
Type: pfam
Location: 2392 - 3405 (+)
Type: pfam
Location: 2392 - 3405 (+)
Gene ID: HRGMv2_3023_42_6
Type: CAZyme
Location: 3534 - 4277 (+)
Type: CAZyme
Location: 3534 - 4277 (+)
Gene ID: HRGMv2_3023_42_7
Type:
Location: 4317 - 4553 (-)
Type:
Location: 4317 - 4553 (-)
Gene ID: HRGMv2_3023_42_8
Type: TC
Location: 4559 - 5200 (-)
Type: TC
Location: 4559 - 5200 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Limousia
Species
Limousia pullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.