Cluster: HRGMv2_3022_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3022
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3022_6 | HRGMv2_3022_6_4 | 5495 | 7909 | + | 3.A.3.5.15 |
| STP | HRGMv2_3022_6 | HRGMv2_3022_6_5 | 8508 | 11303 | - | SpoIIE |
| STP | HRGMv2_3022_6 | HRGMv2_3022_6_6 | 11753 | 12472 | + | Peptidase_M23 |
| TC | HRGMv2_3022_6 | HRGMv2_3022_6_7 | 12645 | 13193 | - | 1.A.22.1.3 |
| CAZyme | HRGMv2_3022_6 | HRGMv2_3022_6_8 | 13320 | 15494 | - | GH36 |
Gene ID: HRGMv2_3022_6_4
Type: TC
Location: 5495 - 7909 (+)
Type: TC
Location: 5495 - 7909 (+)
Gene ID: HRGMv2_3022_6_5
Type: STP
Location: 8508 - 11303 (-)
Type: STP
Location: 8508 - 11303 (-)
Gene ID: HRGMv2_3022_6_6
Type: STP
Location: 11753 - 12472 (+)
Type: STP
Location: 11753 - 12472 (+)
Gene ID: HRGMv2_3022_6_7
Type: TC
Location: 12645 - 13193 (-)
Type: TC
Location: 12645 - 13193 (-)
Gene ID: HRGMv2_3022_6_8
Type: CAZyme
Location: 13320 - 15494 (-)
Type: CAZyme
Location: 13320 - 15494 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
HGM12650
Species
HGM12650 sp900761725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.