Cluster: HRGMv2_3022_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3022
- CGC Family ID: CGCFAM_06187
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3022_4 | HRGMv2_3022_4_133 | 157108 | 158235 | - | GT28 |
| pfam | HRGMv2_3022_4 | HRGMv2_3022_4_134 | 158272 | 159069 | - | ABC_trans_CmpB |
| TC | HRGMv2_3022_4 | HRGMv2_3022_4_135 | 159129 | 160931 | - | 3.A.1.135.6 |
| TC | HRGMv2_3022_4 | HRGMv2_3022_4_136 | 160984 | 162744 | - | 3.A.1.135.6 |
| TC | HRGMv2_3022_4 | HRGMv2_3022_4_137 | 162750 | 163415 | - | 4.F.1.1.7 |
Gene ID: HRGMv2_3022_4_133
Type: CAZyme
Location: 157108 - 158235 (-)
Type: CAZyme
Location: 157108 - 158235 (-)
Gene ID: HRGMv2_3022_4_134
Type: pfam
Location: 158272 - 159069 (-)
Type: pfam
Location: 158272 - 159069 (-)
Gene ID: HRGMv2_3022_4_135
Type: TC
Location: 159129 - 160931 (-)
Type: TC
Location: 159129 - 160931 (-)
Gene ID: HRGMv2_3022_4_136
Type: TC
Location: 160984 - 162744 (-)
Type: TC
Location: 160984 - 162744 (-)
Gene ID: HRGMv2_3022_4_137
Type: TC
Location: 162750 - 163415 (-)
Type: TC
Location: 162750 - 163415 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
HGM12650
Species
HGM12650 sp900761725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.