Cluster: HRGMv2_3022_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3022
- CGC Family ID: CGCFAM_04362
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3022_2 | HRGMv2_3022_2_195 | 216792 | 217559 | - | 9.B.149.1.11 |
| pfam | HRGMv2_3022_2 | HRGMv2_3022_2_196 | 217655 | 218263 | - | GTP_EFTU | MMR_HSR1 | FeoB_N |
| STP | HRGMv2_3022_2 | HRGMv2_3022_2_197 | 218343 | 220703 | - | AAA |
| CAZyme | HRGMv2_3022_2 | HRGMv2_3022_2_198 | 220959 | 221801 | - | CE4 |
| CAZyme | HRGMv2_3022_2 | HRGMv2_3022_2_199 | 221805 | 222680 | - | CE4 |
Gene ID: HRGMv2_3022_2_195
Type: TC
Location: 216792 - 217559 (-)
Type: TC
Location: 216792 - 217559 (-)
Gene ID: HRGMv2_3022_2_196
Type: pfam
Location: 217655 - 218263 (-)
Type: pfam
Location: 217655 - 218263 (-)
Gene ID: HRGMv2_3022_2_197
Type: STP
Location: 218343 - 220703 (-)
Type: STP
Location: 218343 - 220703 (-)
Gene ID: HRGMv2_3022_2_198
Type: CAZyme
Location: 220959 - 221801 (-)
Type: CAZyme
Location: 220959 - 221801 (-)
Gene ID: HRGMv2_3022_2_199
Type: CAZyme
Location: 221805 - 222680 (-)
Type: CAZyme
Location: 221805 - 222680 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
HGM12650
Species
HGM12650 sp900761725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.