Cluster: HRGMv2_3022_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3022
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3022_9 | HRGMv2_3022_9_44 | 46912 | 48234 | + | GH4 |
| CAZyme | HRGMv2_3022_9 | HRGMv2_3022_9_45 | 48292 | 49614 | + | GH4 |
| pfam | HRGMv2_3022_9 | HRGMv2_3022_9_46 | 49729 | 51768 | + | NAGPA |
| pfam | HRGMv2_3022_9 | HRGMv2_3022_9_47 | 51888 | 52466 | + | DUF4358 |
| TC | HRGMv2_3022_9 | HRGMv2_3022_9_48 | 52614 | 53126 | - | 9.A.11.1.1 |
Gene ID: HRGMv2_3022_9_44
Type: CAZyme
Location: 46912 - 48234 (+)
Type: CAZyme
Location: 46912 - 48234 (+)
Gene ID: HRGMv2_3022_9_45
Type: CAZyme
Location: 48292 - 49614 (+)
Type: CAZyme
Location: 48292 - 49614 (+)
Gene ID: HRGMv2_3022_9_46
Type: pfam
Location: 49729 - 51768 (+)
Type: pfam
Location: 49729 - 51768 (+)
Gene ID: HRGMv2_3022_9_47
Type: pfam
Location: 51888 - 52466 (+)
Type: pfam
Location: 51888 - 52466 (+)
Gene ID: HRGMv2_3022_9_48
Type: TC
Location: 52614 - 53126 (-)
Type: TC
Location: 52614 - 53126 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
HGM12650
Species
HGM12650 sp900761725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.