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Cluster: HRGMv2_3022_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3022_1 HRGMv2_3022_1_124 142272 144167 + GH20
peptidase HRGMv2_3022_1 HRGMv2_3022_1_125 144246 145121 - S12.UPW
TC HRGMv2_3022_1 HRGMv2_3022_1_126 145464 146033 + 2.A.107.1.2
TC HRGMv2_3022_1 HRGMv2_3022_1_127 146131 147528 - 3.B.1.1.6
TC HRGMv2_3022_1 HRGMv2_3022_1_128 147550 148743 - 3.B.1.1.2
TC HRGMv2_3022_1 HRGMv2_3022_1_129 148792 149169 - 3.B.1.1.2
pfam HRGMv2_3022_1 HRGMv2_3022_1_130 149279 149701 - OAD_gamma
TC HRGMv2_3022_1 HRGMv2_3022_1_131 149758 151128 - 3.B.1.1.2
Gene ID: HRGMv2_3022_1_124
Type: CAZyme
Location: 142272 - 144167 (+)
Gene ID: HRGMv2_3022_1_125
Type: peptidase
Location: 144246 - 145121 (-)
Gene ID: HRGMv2_3022_1_126
Type: TC
Location: 145464 - 146033 (+)
Gene ID: HRGMv2_3022_1_127
Type: TC
Location: 146131 - 147528 (-)
Gene ID: HRGMv2_3022_1_128
Type: TC
Location: 147550 - 148743 (-)
Gene ID: HRGMv2_3022_1_129
Type: TC
Location: 148792 - 149169 (-)
Gene ID: HRGMv2_3022_1_130
Type: pfam
Location: 149279 - 149701 (-)
Gene ID: HRGMv2_3022_1_131
Type: TC
Location: 149758 - 151128 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
HGM12650
→
Species
HGM12650 sp900761725

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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