Cluster: HRGMv2_3020_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3020
- CGC Family ID: CGCFAM_03001
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3020_6 | HRGMv2_3020_6_39 | 49077 | 50306 | - | GH28 |
| NULL(UNKNOWN) | HRGMv2_3020_6 | HRGMv2_3020_6_40 | 50266 | 50646 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3020_6 | HRGMv2_3020_6_41 | 50705 | 52108 | - | 2.A.66.1.28 |
| NULL(UNKNOWN) | HRGMv2_3020_6 | HRGMv2_3020_6_42 | 52092 | 52298 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3020_6 | HRGMv2_3020_6_43 | 52323 | 54335 | - | 9.A.8.1.6 |
Gene ID: HRGMv2_3020_6_39
Type: CAZyme
Location: 49077 - 50306 (-)
Type: CAZyme
Location: 49077 - 50306 (-)
Gene ID: HRGMv2_3020_6_40
Type:
Location: 50266 - 50646 (-)
Type:
Location: 50266 - 50646 (-)
Gene ID: HRGMv2_3020_6_41
Type: TC
Location: 50705 - 52108 (-)
Type: TC
Location: 50705 - 52108 (-)
Gene ID: HRGMv2_3020_6_42
Type:
Location: 52092 - 52298 (-)
Type:
Location: 52092 - 52298 (-)
Gene ID: HRGMv2_3020_6_43
Type: TC
Location: 52323 - 54335 (-)
Type: TC
Location: 52323 - 54335 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-382
Genus
UMGS882
Species
UMGS882 sp003343885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.