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Cluster: HRGMv2_3020_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3020_4 HRGMv2_3020_4_24 24678 26600 + 3.A.1.121.4
NULL(UNKNOWN) HRGMv2_3020_4 HRGMv2_3020_4_25 26597 26818 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_3020_4 HRGMv2_3020_4_26 27228 30455 + SBP_bac_1
TC HRGMv2_3020_4 HRGMv2_3020_4_27 30489 31439 + 3.A.1.1.4
TC HRGMv2_3020_4 HRGMv2_3020_4_28 31441 32304 + 3.A.1.1.39
pfam HRGMv2_3020_4 HRGMv2_3020_4_29 32318 34540 + Yip1
pfam HRGMv2_3020_4 HRGMv2_3020_4_30 34557 37676 + DUF5696 | DUF5696
TC HRGMv2_3020_4 HRGMv2_3020_4_31 37697 38671 + 3.A.1.1.7
TC HRGMv2_3020_4 HRGMv2_3020_4_32 38691 39704 + 3.A.1.1.39
CAZyme HRGMv2_3020_4 HRGMv2_3020_4_33 39772 41739 + GH106
pfam HRGMv2_3020_4 HRGMv2_3020_4_34 41736 42566 + Formyl_trans_N
TC HRGMv2_3020_4 HRGMv2_3020_4_35 42629 43252 - 3.A.2.3.2
pfam HRGMv2_3020_4 HRGMv2_3020_4_36 43342 44160 - VCA0040-like
TC HRGMv2_3020_4 HRGMv2_3020_4_37 44183 45550 - 3.A.2.3.3
TC HRGMv2_3020_4 HRGMv2_3020_4_38 45547 47340 - 3.A.2.3.2
Gene ID: HRGMv2_3020_4_24
Type: TC
Location: 24678 - 26600 (+)
Gene ID: HRGMv2_3020_4_25
Type:
Location: 26597 - 26818 (+)
Gene ID: HRGMv2_3020_4_26
Type: STP
Location: 27228 - 30455 (+)
Gene ID: HRGMv2_3020_4_27
Type: TC
Location: 30489 - 31439 (+)
Gene ID: HRGMv2_3020_4_28
Type: TC
Location: 31441 - 32304 (+)
Gene ID: HRGMv2_3020_4_29
Type: pfam
Location: 32318 - 34540 (+)
Gene ID: HRGMv2_3020_4_30
Type: pfam
Location: 34557 - 37676 (+)
Gene ID: HRGMv2_3020_4_31
Type: TC
Location: 37697 - 38671 (+)
Gene ID: HRGMv2_3020_4_32
Type: TC
Location: 38691 - 39704 (+)
Gene ID: HRGMv2_3020_4_33
Type: CAZyme
Location: 39772 - 41739 (+)
Gene ID: HRGMv2_3020_4_34
Type: pfam
Location: 41736 - 42566 (+)
Gene ID: HRGMv2_3020_4_35
Type: TC
Location: 42629 - 43252 (-)
Gene ID: HRGMv2_3020_4_36
Type: pfam
Location: 43342 - 44160 (-)
Gene ID: HRGMv2_3020_4_37
Type: TC
Location: 44183 - 45550 (-)
Gene ID: HRGMv2_3020_4_38
Type: TC
Location: 45547 - 47340 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-382
→
Genus
UMGS882
→
Species
UMGS882 sp003343885

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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