Cluster: HRGMv2_3020_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3020
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3020_3 | HRGMv2_3020_3_95 | 88832 | 89527 | - | 5.A.1.2.7 |
| NULL(UNKNOWN) | HRGMv2_3020_3 | HRGMv2_3020_3_96 | 89675 | 90109 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_3020_3 | HRGMv2_3020_3_97 | 90171 | 90836 | - | Crp |
| CAZyme | HRGMv2_3020_3 | HRGMv2_3020_3_98 | 91119 | 98864 | + | GH94 | GT84 |
| TF | HRGMv2_3020_3 | HRGMv2_3020_3_99 | 98963 | 99847 | - | HTH_1 |
| TC | HRGMv2_3020_3 | HRGMv2_3020_3_100 | 99969 | 100556 | + | 2.A.51.1.6 |
| TC | HRGMv2_3020_3 | HRGMv2_3020_3_101 | 100553 | 101119 | + | 2.A.51.1.6 |
Gene ID: HRGMv2_3020_3_95
Type: TC
Location: 88832 - 89527 (-)
Type: TC
Location: 88832 - 89527 (-)
Gene ID: HRGMv2_3020_3_96
Type:
Location: 89675 - 90109 (-)
Type:
Location: 89675 - 90109 (-)
Gene ID: HRGMv2_3020_3_97
Type: TF
Location: 90171 - 90836 (-)
Type: TF
Location: 90171 - 90836 (-)
Gene ID: HRGMv2_3020_3_98
Type: CAZyme
Location: 91119 - 98864 (+)
Type: CAZyme
Location: 91119 - 98864 (+)
Gene ID: HRGMv2_3020_3_99
Type: TF
Location: 98963 - 99847 (-)
Type: TF
Location: 98963 - 99847 (-)
Gene ID: HRGMv2_3020_3_100
Type: TC
Location: 99969 - 100556 (+)
Type: TC
Location: 99969 - 100556 (+)
Gene ID: HRGMv2_3020_3_101
Type: TC
Location: 100553 - 101119 (+)
Type: TC
Location: 100553 - 101119 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-382
Genus
UMGS882
Species
UMGS882 sp003343885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.