Cluster: HRGMv2_3020_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3020
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3020_76 | HRGMv2_3020_76_4 | 3117 | 3959 | + | 3.A.1.149.1 |
| pfam | HRGMv2_3020_76 | HRGMv2_3020_76_5 | 3961 | 4587 | + | ABC2_membrane_5 |
| pfam | HRGMv2_3020_76 | HRGMv2_3020_76_6 | 4787 | 5947 | - | DXP_reductoisom | DXP_redisom_C | DXPR_C |
| CAZyme | HRGMv2_3020_76 | HRGMv2_3020_76_7 | 5996 | 6637 | - | GH28 |
Gene ID: HRGMv2_3020_76_4
Type: TC
Location: 3117 - 3959 (+)
Type: TC
Location: 3117 - 3959 (+)
Gene ID: HRGMv2_3020_76_5
Type: pfam
Location: 3961 - 4587 (+)
Type: pfam
Location: 3961 - 4587 (+)
Gene ID: HRGMv2_3020_76_6
Type: pfam
Location: 4787 - 5947 (-)
Type: pfam
Location: 4787 - 5947 (-)
Gene ID: HRGMv2_3020_76_7
Type: CAZyme
Location: 5996 - 6637 (-)
Type: CAZyme
Location: 5996 - 6637 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-382
Genus
UMGS882
Species
UMGS882 sp003343885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.