Cluster: HRGMv2_3020_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3020
- CGC Family ID: CGCFAM_06169
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3020_46 | HRGMv2_3020_46_13 | 12253 | 14409 | + | 9.B.106.3.1 |
| pfam | HRGMv2_3020_46 | HRGMv2_3020_46_14 | 14551 | 15486 | + | MMR_HSR1 | RsgA_GTPase | RsgA_N |
| NULL(UNKNOWN) | HRGMv2_3020_46 | HRGMv2_3020_46_15 | 15517 | 15741 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3020_46 | HRGMv2_3020_46_16 | 15945 | 17447 | - | GH39 |
Gene ID: HRGMv2_3020_46_13
Type: TC
Location: 12253 - 14409 (+)
Type: TC
Location: 12253 - 14409 (+)
Gene ID: HRGMv2_3020_46_14
Type: pfam
Location: 14551 - 15486 (+)
Type: pfam
Location: 14551 - 15486 (+)
Gene ID: HRGMv2_3020_46_15
Type:
Location: 15517 - 15741 (+)
Type:
Location: 15517 - 15741 (+)
Gene ID: HRGMv2_3020_46_16
Type: CAZyme
Location: 15945 - 17447 (-)
Type: CAZyme
Location: 15945 - 17447 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-382
Genus
UMGS882
Species
UMGS882 sp003343885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.