Cluster: HRGMv2_3020_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3020
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3020_39 | HRGMv2_3020_39_13 | 13792 | 15159 | - | 2.A.22.5.3 |
| pfam | HRGMv2_3020_39 | HRGMv2_3020_39_14 | 15407 | 16186 | - | AP_endonuc_2 |
| CAZyme | HRGMv2_3020_39 | HRGMv2_3020_39_15 | 16275 | 17360 | - | GT2 |
| pfam | HRGMv2_3020_39 | HRGMv2_3020_39_16 | 17563 | 19083 | + | Collagen |
| TC | HRGMv2_3020_39 | HRGMv2_3020_39_17 | 19219 | 21207 | - | 9.B.18.2.1 |
| TC | HRGMv2_3020_39 | HRGMv2_3020_39_18 | 21480 | 22565 | - | 2.A.120.1.11 |
Gene ID: HRGMv2_3020_39_13
Type: TC
Location: 13792 - 15159 (-)
Type: TC
Location: 13792 - 15159 (-)
Gene ID: HRGMv2_3020_39_14
Type: pfam
Location: 15407 - 16186 (-)
Type: pfam
Location: 15407 - 16186 (-)
Gene ID: HRGMv2_3020_39_15
Type: CAZyme
Location: 16275 - 17360 (-)
Type: CAZyme
Location: 16275 - 17360 (-)
Gene ID: HRGMv2_3020_39_16
Type: pfam
Location: 17563 - 19083 (+)
Type: pfam
Location: 17563 - 19083 (+)
Gene ID: HRGMv2_3020_39_17
Type: TC
Location: 19219 - 21207 (-)
Type: TC
Location: 19219 - 21207 (-)
Gene ID: HRGMv2_3020_39_18
Type: TC
Location: 21480 - 22565 (-)
Type: TC
Location: 21480 - 22565 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-382
Genus
UMGS882
Species
UMGS882 sp003343885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.