Cluster: HRGMv2_3020_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3020
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3020_22 | HRGMv2_3020_22_8 | 17477 | 18760 | + | 2.A.6.4.2 |
| TC | HRGMv2_3020_22 | HRGMv2_3020_22_9 | 18778 | 19941 | + | 2.A.6.4.2 |
| pfam | HRGMv2_3020_22 | HRGMv2_3020_22_10 | 20141 | 24778 | + | SLH | SLH | Cu_amine_oxidN1 |
| CAZyme | HRGMv2_3020_22 | HRGMv2_3020_22_11 | 25159 | 30384 | - | GH99 |
Gene ID: HRGMv2_3020_22_8
Type: TC
Location: 17477 - 18760 (+)
Type: TC
Location: 17477 - 18760 (+)
Gene ID: HRGMv2_3020_22_9
Type: TC
Location: 18778 - 19941 (+)
Type: TC
Location: 18778 - 19941 (+)
Gene ID: HRGMv2_3020_22_10
Type: pfam
Location: 20141 - 24778 (+)
Type: pfam
Location: 20141 - 24778 (+)
Gene ID: HRGMv2_3020_22_11
Type: CAZyme
Location: 25159 - 30384 (-)
Type: CAZyme
Location: 25159 - 30384 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-382
Genus
UMGS882
Species
UMGS882 sp003343885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.