Cluster: HRGMv2_3020_CGC18
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3020
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3020_17 | HRGMv2_3020_17_14 | 17113 | 19635 | + | GH116 |
| pfam | HRGMv2_3020_17 | HRGMv2_3020_17_15 | 19671 | 20495 | + | AP_endonuc_2 |
| TC | HRGMv2_3020_17 | HRGMv2_3020_17_16 | 20609 | 22198 | - | 2.A.21.2.5 |
Gene ID: HRGMv2_3020_17_14
Type: CAZyme
Location: 17113 - 19635 (+)
Type: CAZyme
Location: 17113 - 19635 (+)
Gene ID: HRGMv2_3020_17_15
Type: pfam
Location: 19671 - 20495 (+)
Type: pfam
Location: 19671 - 20495 (+)
Gene ID: HRGMv2_3020_17_16
Type: TC
Location: 20609 - 22198 (-)
Type: TC
Location: 20609 - 22198 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-382
Genus
UMGS882
Species
UMGS882 sp003343885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.