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Cluster: HRGMv2_3020_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3020_14 HRGMv2_3020_14_9 9109 10503 - 3.B.1.1.6
TC HRGMv2_3020_14 HRGMv2_3020_14_10 10563 11780 - 3.B.1.1.2
TC HRGMv2_3020_14 HRGMv2_3020_14_11 11808 12212 - 3.B.1.1.3
pfam HRGMv2_3020_14 HRGMv2_3020_14_12 12255 12653 - OAD_gamma
TC HRGMv2_3020_14 HRGMv2_3020_14_13 12687 14174 - 3.B.1.1.5
pfam HRGMv2_3020_14 HRGMv2_3020_14_14 14399 15211 - adh_short | adh_short_C2
NULL(UNKNOWN) HRGMv2_3020_14 HRGMv2_3020_14_15 15279 17270 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3020_14 HRGMv2_3020_14_16 17337 17930 - GH16
Gene ID: HRGMv2_3020_14_9
Type: TC
Location: 9109 - 10503 (-)
Gene ID: HRGMv2_3020_14_10
Type: TC
Location: 10563 - 11780 (-)
Gene ID: HRGMv2_3020_14_11
Type: TC
Location: 11808 - 12212 (-)
Gene ID: HRGMv2_3020_14_12
Type: pfam
Location: 12255 - 12653 (-)
Gene ID: HRGMv2_3020_14_13
Type: TC
Location: 12687 - 14174 (-)
Gene ID: HRGMv2_3020_14_14
Type: pfam
Location: 14399 - 15211 (-)
Gene ID: HRGMv2_3020_14_15
Type:
Location: 15279 - 17270 (-)
Gene ID: HRGMv2_3020_14_16
Type: CAZyme
Location: 17337 - 17930 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-382
→
Genus
UMGS882
→
Species
UMGS882 sp003343885

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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