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Cluster: HRGMv2_3020_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3020_11 HRGMv2_3020_11_4 2105 3430 - GH39
NULL(UNKNOWN) HRGMv2_3020_11 HRGMv2_3020_11_5 3655 4374 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3020_11 HRGMv2_3020_11_6 5103 5228 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3020_11 HRGMv2_3020_11_7 5237 6286 - 3.A.1.2.3
TC HRGMv2_3020_11 HRGMv2_3020_11_8 6310 7809 - 3.A.1.2.3
TC HRGMv2_3020_11 HRGMv2_3020_11_9 7863 8960 - 3.A.1.2.3
TF HRGMv2_3020_11 HRGMv2_3020_11_10 9116 9994 - HTH_AraC
pfam HRGMv2_3020_11 HRGMv2_3020_11_11 10102 10959 + AP_endonuc_2
CAZyme HRGMv2_3020_11 HRGMv2_3020_11_12 11070 12131 + GH179
Gene ID: HRGMv2_3020_11_4
Type: CAZyme
Location: 2105 - 3430 (-)
Gene ID: HRGMv2_3020_11_5
Type:
Location: 3655 - 4374 (-)
Gene ID: HRGMv2_3020_11_6
Type:
Location: 5103 - 5228 (-)
Gene ID: HRGMv2_3020_11_7
Type: TC
Location: 5237 - 6286 (-)
Gene ID: HRGMv2_3020_11_8
Type: TC
Location: 6310 - 7809 (-)
Gene ID: HRGMv2_3020_11_9
Type: TC
Location: 7863 - 8960 (-)
Gene ID: HRGMv2_3020_11_10
Type: TF
Location: 9116 - 9994 (-)
Gene ID: HRGMv2_3020_11_11
Type: pfam
Location: 10102 - 10959 (+)
Gene ID: HRGMv2_3020_11_12
Type: CAZyme
Location: 11070 - 12131 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-382
→
Genus
UMGS882
→
Species
UMGS882 sp003343885

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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