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Cluster: HRGMv2_3020_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3020_9 HRGMv2_3020_9_38 36154 37953 + 3.D.1.5.1
TC HRGMv2_3020_9 HRGMv2_3020_9_39 37969 39723 + 3.D.1.1.1
TC HRGMv2_3020_9 HRGMv2_3020_9_40 39855 40856 + 3.A.1.121.4
peptidase HRGMv2_3020_9 HRGMv2_3020_9_41 40985 41782 - S09.UPW
pfam HRGMv2_3020_9 HRGMv2_3020_9_42 41810 43054 - SLH | SLH
CAZyme HRGMv2_3020_9 HRGMv2_3020_9_43 43116 46070 - GT51
NULL(UNKNOWN) HRGMv2_3020_9 HRGMv2_3020_9_44 46168 46554 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3020_9 HRGMv2_3020_9_45 46568 46885 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3020_9 HRGMv2_3020_9_46 47046 49607 + GH2
Gene ID: HRGMv2_3020_9_38
Type: TC
Location: 36154 - 37953 (+)
Gene ID: HRGMv2_3020_9_39
Type: TC
Location: 37969 - 39723 (+)
Gene ID: HRGMv2_3020_9_40
Type: TC
Location: 39855 - 40856 (+)
Gene ID: HRGMv2_3020_9_41
Type: peptidase
Location: 40985 - 41782 (-)
Gene ID: HRGMv2_3020_9_42
Type: pfam
Location: 41810 - 43054 (-)
Gene ID: HRGMv2_3020_9_43
Type: CAZyme
Location: 43116 - 46070 (-)
Gene ID: HRGMv2_3020_9_44
Type:
Location: 46168 - 46554 (+)
Gene ID: HRGMv2_3020_9_45
Type:
Location: 46568 - 46885 (-)
Gene ID: HRGMv2_3020_9_46
Type: CAZyme
Location: 47046 - 49607 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-382
→
Genus
UMGS882
→
Species
UMGS882 sp003343885

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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