Cluster: HRGMv2_3020_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3020
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3020_7 | HRGMv2_3020_7_2 | 6168 | 7895 | - | GH2 |
| TF | HRGMv2_3020_7 | HRGMv2_3020_7_3 | 7996 | 8799 | + | HTH_AraC | HTH_AraC |
| pfam | HRGMv2_3020_7 | HRGMv2_3020_7_4 | 8814 | 9641 | - | BacA |
| TC | HRGMv2_3020_7 | HRGMv2_3020_7_5 | 9677 | 10411 | - | 1.C.109.1.5 |
| sulfatase | HRGMv2_3020_7 | HRGMv2_3020_7_6 | 10595 | 12418 | - | S1_97 |
| TC | HRGMv2_3020_7 | HRGMv2_3020_7_7 | 12652 | 13350 | + | 2.A.78.1.1 |
| TC | HRGMv2_3020_7 | HRGMv2_3020_7_8 | 13365 | 13697 | + | 2.A.78.1.1 |
Gene ID: HRGMv2_3020_7_2
Type: CAZyme
Location: 6168 - 7895 (-)
Type: CAZyme
Location: 6168 - 7895 (-)
Gene ID: HRGMv2_3020_7_3
Type: TF
Location: 7996 - 8799 (+)
Type: TF
Location: 7996 - 8799 (+)
Gene ID: HRGMv2_3020_7_4
Type: pfam
Location: 8814 - 9641 (-)
Type: pfam
Location: 8814 - 9641 (-)
Gene ID: HRGMv2_3020_7_5
Type: TC
Location: 9677 - 10411 (-)
Type: TC
Location: 9677 - 10411 (-)
Gene ID: HRGMv2_3020_7_6
Type: sulfatase
Location: 10595 - 12418 (-)
Type: sulfatase
Location: 10595 - 12418 (-)
Gene ID: HRGMv2_3020_7_7
Type: TC
Location: 12652 - 13350 (+)
Type: TC
Location: 12652 - 13350 (+)
Gene ID: HRGMv2_3020_7_8
Type: TC
Location: 13365 - 13697 (+)
Type: TC
Location: 13365 - 13697 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-382
Genus
UMGS882
Species
UMGS882 sp003343885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.