Cluster: HRGMv2_3018_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3018
- CGC Family ID: CGCFAM_06199
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3018_1 | HRGMv2_3018_1_182 | 196321 | 198771 | + | GH3 |
| pfam | HRGMv2_3018_1 | HRGMv2_3018_1_183 | 198845 | 199750 | - | VanW |
| pfam | HRGMv2_3018_1 | HRGMv2_3018_1_184 | 199788 | 201152 | - | Hexapep | NTP_transferase | IspD | CTP_transf_3 | NTP_transf_3 | Hexapep_GlmU |
| TC | HRGMv2_3018_1 | HRGMv2_3018_1_185 | 201392 | 204019 | + | 4.A.2.1.17 |
| CAZyme | HRGMv2_3018_1 | HRGMv2_3018_1_186 | 204211 | 205869 | - | GH13_31 |
Gene ID: HRGMv2_3018_1_182
Type: CAZyme
Location: 196321 - 198771 (+)
Type: CAZyme
Location: 196321 - 198771 (+)
Gene ID: HRGMv2_3018_1_183
Type: pfam
Location: 198845 - 199750 (-)
Type: pfam
Location: 198845 - 199750 (-)
Gene ID: HRGMv2_3018_1_184
Type: pfam
Location: 199788 - 201152 (-)
Type: pfam
Location: 199788 - 201152 (-)
Gene ID: HRGMv2_3018_1_185
Type: TC
Location: 201392 - 204019 (+)
Type: TC
Location: 201392 - 204019 (+)
Gene ID: HRGMv2_3018_1_186
Type: CAZyme
Location: 204211 - 205869 (-)
Type: CAZyme
Location: 204211 - 205869 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scybalenecus
Species
Scybalenecus sp900540085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.