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Cluster: HRGMv2_3018_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3018_1 HRGMv2_3018_1_80 80161 82044 + CBM48 | GH13_9
pfam HRGMv2_3018_1 HRGMv2_3018_1_81 82058 83266 + NTP_transferase | Hexapep_GlmU
pfam HRGMv2_3018_1 HRGMv2_3018_1_82 83269 84390 + NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_3018_1 HRGMv2_3018_1_83 84401 85825 + GT5
NULL(UNKNOWN) HRGMv2_3018_1 HRGMv2_3018_1_84 86118 87665 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3018_1 HRGMv2_3018_1_85 88079 88444 + Desulfoferrodox
TC HRGMv2_3018_1 HRGMv2_3018_1_86 88550 89926 - 2.A.66.1.22
sulfatase HRGMv2_3018_1 HRGMv2_3018_1_87 90143 91198 - S1_4
STP HRGMv2_3018_1 HRGMv2_3018_1_88 91422 92171 + FHA | FHA
TC HRGMv2_3018_1 HRGMv2_3018_1_89 92184 93443 + 2.A.103.1.3
Gene ID: HRGMv2_3018_1_80
Type: CAZyme
Location: 80161 - 82044 (+)
Gene ID: HRGMv2_3018_1_81
Type: pfam
Location: 82058 - 83266 (+)
Gene ID: HRGMv2_3018_1_82
Type: pfam
Location: 83269 - 84390 (+)
Gene ID: HRGMv2_3018_1_83
Type: CAZyme
Location: 84401 - 85825 (+)
Gene ID: HRGMv2_3018_1_84
Type:
Location: 86118 - 87665 (-)
Gene ID: HRGMv2_3018_1_85
Type: pfam
Location: 88079 - 88444 (+)
Gene ID: HRGMv2_3018_1_86
Type: TC
Location: 88550 - 89926 (-)
Gene ID: HRGMv2_3018_1_87
Type: sulfatase
Location: 90143 - 91198 (-)
Gene ID: HRGMv2_3018_1_88
Type: STP
Location: 91422 - 92171 (+)
Gene ID: HRGMv2_3018_1_89
Type: TC
Location: 92184 - 93443 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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