Cluster: HRGMv2_3018_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3018
- CGC Family ID: CGCFAM_10287
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3018_8 | HRGMv2_3018_8_49 | 48425 | 49510 | - | 3.A.1.2.3 |
| TC | HRGMv2_3018_8 | HRGMv2_3018_8_50 | 49531 | 51078 | - | 3.A.1.2.3 |
| TC | HRGMv2_3018_8 | HRGMv2_3018_8_51 | 51185 | 52279 | - | 3.A.1.2.3 |
| STP | HRGMv2_3018_8 | HRGMv2_3018_8_52 | 52675 | 53646 | - | Peripla_BP_1 |
| TC | HRGMv2_3018_8 | HRGMv2_3018_8_53 | 53630 | 55366 | - | 9.B.33.1.1 |
| TF | HRGMv2_3018_8 | HRGMv2_3018_8_54 | 55369 | 56952 | - | HTH_AraC |
| CAZyme | HRGMv2_3018_8 | HRGMv2_3018_8_55 | 57145 | 59136 | - | GH18 |
Gene ID: HRGMv2_3018_8_49
Type: TC
Location: 48425 - 49510 (-)
Type: TC
Location: 48425 - 49510 (-)
Gene ID: HRGMv2_3018_8_50
Type: TC
Location: 49531 - 51078 (-)
Type: TC
Location: 49531 - 51078 (-)
Gene ID: HRGMv2_3018_8_51
Type: TC
Location: 51185 - 52279 (-)
Type: TC
Location: 51185 - 52279 (-)
Gene ID: HRGMv2_3018_8_52
Type: STP
Location: 52675 - 53646 (-)
Type: STP
Location: 52675 - 53646 (-)
Gene ID: HRGMv2_3018_8_53
Type: TC
Location: 53630 - 55366 (-)
Type: TC
Location: 53630 - 55366 (-)
Gene ID: HRGMv2_3018_8_54
Type: TF
Location: 55369 - 56952 (-)
Type: TF
Location: 55369 - 56952 (-)
Gene ID: HRGMv2_3018_8_55
Type: CAZyme
Location: 57145 - 59136 (-)
Type: CAZyme
Location: 57145 - 59136 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scybalenecus
Species
Scybalenecus sp900540085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.