Cluster: HRGMv2_3018_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3018
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3018_5 | HRGMv2_3018_5_84 | 86150 | 87499 | + | 3.D.10.1.6 |
| pfam | HRGMv2_3018_5 | HRGMv2_3018_5_85 | 87462 | 88319 | + | QRPTase_C | QRPTase_N |
| STP | HRGMv2_3018_5 | HRGMv2_3018_5_86 | 88462 | 90573 | + | SpoIIE |
| CAZyme | HRGMv2_3018_5 | HRGMv2_3018_5_87 | 90630 | 91964 | - | CE4 |
| STP | HRGMv2_3018_5 | HRGMv2_3018_5_88 | 92190 | 92735 | + | TetR_N |
| pfam | HRGMv2_3018_5 | HRGMv2_3018_5_89 | 92772 | 94244 | + | Metallophos |
| CAZyme | HRGMv2_3018_5 | HRGMv2_3018_5_90 | 94332 | 95837 | - | GH20 |
Gene ID: HRGMv2_3018_5_84
Type: TC
Location: 86150 - 87499 (+)
Type: TC
Location: 86150 - 87499 (+)
Gene ID: HRGMv2_3018_5_85
Type: pfam
Location: 87462 - 88319 (+)
Type: pfam
Location: 87462 - 88319 (+)
Gene ID: HRGMv2_3018_5_86
Type: STP
Location: 88462 - 90573 (+)
Type: STP
Location: 88462 - 90573 (+)
Gene ID: HRGMv2_3018_5_87
Type: CAZyme
Location: 90630 - 91964 (-)
Type: CAZyme
Location: 90630 - 91964 (-)
Gene ID: HRGMv2_3018_5_88
Type: STP
Location: 92190 - 92735 (+)
Type: STP
Location: 92190 - 92735 (+)
Gene ID: HRGMv2_3018_5_89
Type: pfam
Location: 92772 - 94244 (+)
Type: pfam
Location: 92772 - 94244 (+)
Gene ID: HRGMv2_3018_5_90
Type: CAZyme
Location: 94332 - 95837 (-)
Type: CAZyme
Location: 94332 - 95837 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scybalenecus
Species
Scybalenecus sp900540085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.