Cluster: HRGMv2_3018_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3018
- CGC Family ID: CGCFAM_01717
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3018_5 | HRGMv2_3018_5_33 | 34807 | 37566 | - | 3.A.5.1.3 |
| NULL(UNKNOWN) | HRGMv2_3018_5 | HRGMv2_3018_5_34 | 37676 | 38293 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3018_5 | HRGMv2_3018_5_35 | 38532 | 39152 | + | Cyclase |
| TC | HRGMv2_3018_5 | HRGMv2_3018_5_36 | 39149 | 39754 | + | 9.B.18.1.2 |
| CAZyme | HRGMv2_3018_5 | HRGMv2_3018_5_37 | 39781 | 42816 | + | GH2 |
Gene ID: HRGMv2_3018_5_33
Type: TC
Location: 34807 - 37566 (-)
Type: TC
Location: 34807 - 37566 (-)
Gene ID: HRGMv2_3018_5_34
Type:
Location: 37676 - 38293 (-)
Type:
Location: 37676 - 38293 (-)
Gene ID: HRGMv2_3018_5_35
Type: pfam
Location: 38532 - 39152 (+)
Type: pfam
Location: 38532 - 39152 (+)
Gene ID: HRGMv2_3018_5_36
Type: TC
Location: 39149 - 39754 (+)
Type: TC
Location: 39149 - 39754 (+)
Gene ID: HRGMv2_3018_5_37
Type: CAZyme
Location: 39781 - 42816 (+)
Type: CAZyme
Location: 39781 - 42816 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scybalenecus
Species
Scybalenecus sp900540085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.