Cluster: HRGMv2_3017_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3017
- CGC Family ID: CGCFAM_02093
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3017_6 | HRGMv2_3017_6_59 | 57432 | 58205 | + | 3.A.1.16.4 |
| TC | HRGMv2_3017_6 | HRGMv2_3017_6_60 | 58187 | 58975 | + | 3.A.1.16.1 |
| STP | HRGMv2_3017_6 | HRGMv2_3017_6_61 | 59027 | 60091 | + | SBP_bac_3 |
| CAZyme | HRGMv2_3017_6 | HRGMv2_3017_6_62 | 60152 | 61285 | + | CE9 |
| NULL(UNKNOWN) | HRGMv2_3017_6 | HRGMv2_3017_6_63 | 61390 | 61623 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3017_6 | HRGMv2_3017_6_64 | 61849 | 63081 | + | UPF0004 | Radical_SAM |
| TC | HRGMv2_3017_6 | HRGMv2_3017_6_65 | 63136 | 63744 | + | 2.A.115.1.2 |
Gene ID: HRGMv2_3017_6_59
Type: TC
Location: 57432 - 58205 (+)
Type: TC
Location: 57432 - 58205 (+)
Gene ID: HRGMv2_3017_6_60
Type: TC
Location: 58187 - 58975 (+)
Type: TC
Location: 58187 - 58975 (+)
Gene ID: HRGMv2_3017_6_61
Type: STP
Location: 59027 - 60091 (+)
Type: STP
Location: 59027 - 60091 (+)
Gene ID: HRGMv2_3017_6_62
Type: CAZyme
Location: 60152 - 61285 (+)
Type: CAZyme
Location: 60152 - 61285 (+)
Gene ID: HRGMv2_3017_6_63
Type:
Location: 61390 - 61623 (-)
Type:
Location: 61390 - 61623 (-)
Gene ID: HRGMv2_3017_6_64
Type: pfam
Location: 61849 - 63081 (+)
Type: pfam
Location: 61849 - 63081 (+)
Gene ID: HRGMv2_3017_6_65
Type: TC
Location: 63136 - 63744 (+)
Type: TC
Location: 63136 - 63744 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp900547405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.